Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165889RASD family member 2. (414 aa)    
Predicted Functional Partners:
ENSORLP00000032656
Uncharacterized protein.
    
 0.518
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.516
LOC101165932
Intersectin 2a.
    
 0.516
ENSORLP00000034742
Uncharacterized protein.
    
 0.516
ENSORLP00000036645
EH domain-containing protein.
    
 0.516
ENSORLP00000041578
SH3 domain-containing protein.
    
 0.516
LOC101158786
Cholinergic receptor, nicotinic, alpha 10a.
   
 
 0.480
LOC101157879
Uncharacterized protein.
   
 
 0.480
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.451
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.451
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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