Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
LOC101172193Peroxisomal biogenesis factor 5-like b. (603 aa)    
Predicted Functional Partners:
pex7
Peroxisomal biogenesis factor 7.
    
 0.993
pex14
Peroxisomal biogenesis factor 14.
   
 0.992
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
  
 0.957
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.942
pex13
Peroxisomal biogenesis factor 13.
   
 0.939
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.928
LOC101172485
Sterol carrier protein 2b.
   
 0.928
pex10
Peroxisomal biogenesis factor 10.
    
 0.923
pex5
Peroxisomal biogenesis factor 5.
  
  
 
0.907
pex5l
Peroxisomal biogenesis factor 5-like a.
  
  
 
0.902
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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