STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101172193Peroxisomal biogenesis factor 5-like b. (603 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.996
LOC101172485
Sterol carrier protein 2b.
   
 0.996
pex14
Peroxisomal biogenesis factor 14.
   
 0.995
pex7
Peroxisomal biogenesis factor 7.
    
 0.992
LOC101155936
NBR1 autophagy cargo receptor b.
    
 0.979
nbr1
NBR1 autophagy cargo receptor a.
    
 0.979
eci2
Enoyl-CoA delta isomerase 2.
   
 0.973
hsdl2
Hydroxysteroid dehydrogenase like 2.
   
 0.966
ephx2
AB hydrolase-1 domain-containing protein.
   
 0.961
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
  
 0.944
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.