STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165828Fibronectin type-III domain-containing protein. (551 aa)    
Predicted Functional Partners:
il10
Interleukin 10.
     
 0.938
LOC101166837
Uncharacterized protein.
     
 0.924
LOC101166593
Uncharacterized protein.
     
 0.919
LOC101169927
Uncharacterized protein.
  
     0.515
ENSORLP00000026484
Uncharacterized protein.
  
     0.509
ENSORLP00000032468
Uncharacterized protein.
  
     0.508
ENSORLP00000043372
Uncharacterized protein.
  
     0.508
ENSORLP00000042423
Uncharacterized protein.
  
     0.505
ENSORLP00000036021
Uncharacterized protein.
  
     0.504
ENSORLP00000032979
Uncharacterized protein.
  
     0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.