STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166386Fructosamine 3 kinase related protein; Belongs to the fructosamine kinase family. (309 aa)    
Predicted Functional Partners:
snx13
Sorting nexin 13.
 
      0.850
tbcd
Tubulin folding cofactor D.
 
  
 0.633
adck1
AarF domain containing kinase 1.
  
  
 0.582
LOC101158040
Cdkn1a interacting zinc finger protein 1a.
   
  
 0.561
LOC101166150
Heat shock protein, alpha-crystallin-related, b15; Belongs to the small heat shock protein (HSP20) family.
      
 0.559
b3gntl1
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1.
      
 0.558
wdr18
WD repeat domain 18.
      
 0.493
vat1l
Vesicle amine transport 1-like.
  
  
 0.462
LOC105353898
Cortexin 1.
      
 0.455
gpsm2
Uncharacterized protein.
      
 0.451
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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