Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTFP1Mitochondrial fission process 1. (164 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
 0.642
dap3
Death associated protein 3.
      
 0.641
immt
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
      
 0.608
snx15
Sorting nexin 15.
      
 0.595
eci1
Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  
 0.542
rps27a
Ribosomal protein S27a.
    
  0.501
pxmp2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
      
 0.474
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.467
vkorc1
Vitamin K epoxide reductase complex, subunit 1.
      
 0.464
mrpl47
Mitochondrial ribosomal protein L47.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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