STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf750Zinc finger protein 750. (600 aa)    
Predicted Functional Partners:
ENSORLP00000027006
Uncharacterized protein.
      
 0.717
LOC101170136
Grainyhead-like transcription factor 3.
   
  
 0.707
ppl
Periplakin.
   
  
 0.607
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.505
med23
Mediator complex subunit 23.
      
 0.490
rhbdl2
Rhomboid-related protein 2; Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
      
 0.482
trim33
Tripartite motif containing 33.
     
  0.478
LOC101161205
Uncharacterized protein.
     
  0.478
wdr5
WD repeat domain 5.
      
 0.462
IL12B
Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.
  
     0.461
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.