Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
galnt18Polypeptide N-acetylgalactosaminyltransferase. (609 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.742
gcnt1
Uncharacterized protein.
     
 0.730
c1galt1
Si:dkey-202e17.1.
     
 0.713
LOC101170759
Uncharacterized protein.
     
 0.695
LOC101156399
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.695
LOC101164026
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.691
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.542
RILPL1
Rab interacting lysosomal protein like 1.
      
 0.514
ccnb3
Cyclin B3; Belongs to the cyclin family.
      
 0.507
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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