Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ca12Carbonic anhydrase XII; Belongs to the alpha-carbonic anhydrase family. (557 aa)    
Predicted Functional Partners:
cbln1
Cerebellin 1 precursor.
      
 0.652
LOC101154811
Uncharacterized protein; Belongs to the alpha-carbonic anhydrase family.
  
  
0.632
LOC101170109
Neurexophilin; May be signaling molecules that resemble neuropeptides.
   
  
 0.602
rpf2
Ribosome production factor 2 homolog.
   
 
 0.593
LOC101169059
Carbonic anhydrase IV a; Belongs to the alpha-carbonic anhydrase family.
  
  
0.591
LOC101168466
Uncharacterized protein; Belongs to the parvalbumin family.
      
 0.578
H2LPS6_ORYLA
Potassium voltage-gated channel, shaker-related subfamily, member 2a; Belongs to the potassium channel family.
   
  
 0.534
LOC101161480
Potassium voltage-gated channel, shaker-related subfamily, member 1a; Belongs to the potassium channel family.
   
  
 0.529
grwd1
Glutamate-rich WD repeat containing 1.
   
  
 0.514
hyou1
Hypoxia up-regulated 1.
      
 0.514
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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