usp3 protein (Oryzias latipes) - STRING interaction network

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usp3

Ubiquitin carboxyl-terminal hydrolase. (584 aa)

Predicted Functional Partners:

ubc

0.921

LOC101159038

0.858

tada3

0.852

taf10

0.851

trrap

0.843

rps27a

0.829

tada2b

0.788

sgf29

0.785

LOC101173720

0.781

taf12

0.767

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101159038	LOC101173720	ENSORLP00000016388	ENSORLP00000035209	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.996
LOC101159038	rps27a	ENSORLP00000016388	ENSORLP00000038189	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Ribosomal protein S27a.	0.592
LOC101159038	sgf29	ENSORLP00000016388	ENSORLP00000026405	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	SAGA complex associated factor 29.	0.997
LOC101159038	tada2b	ENSORLP00000016388	ENSORLP00000044705	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcriptional adapter.	0.998
LOC101159038	tada3	ENSORLP00000016388	ENSORLP00000045058	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.	0.999
LOC101159038	taf10	ENSORLP00000016388	ENSORLP00000045875	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
LOC101159038	taf12	ENSORLP00000016388	ENSORLP00000027474	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
LOC101159038	trrap	ENSORLP00000016388	ENSORLP00000042766	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.999
LOC101159038	ubc	ENSORLP00000016388	ENSORLP00000015065	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Ubiquitin B.	0.605
LOC101159038	usp3	ENSORLP00000016388	ENSORLP00000009217	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Ubiquitin carboxyl-terminal hydrolase.	0.858
LOC101173720	LOC101159038	ENSORLP00000035209	ENSORLP00000016388	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.996
LOC101173720	sgf29	ENSORLP00000035209	ENSORLP00000026405	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	SAGA complex associated factor 29.	0.998
LOC101173720	tada2b	ENSORLP00000035209	ENSORLP00000044705	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Transcriptional adapter.	0.986
LOC101173720	tada3	ENSORLP00000035209	ENSORLP00000045058	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.	0.996
LOC101173720	taf10	ENSORLP00000035209	ENSORLP00000045875	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.996
LOC101173720	taf12	ENSORLP00000035209	ENSORLP00000027474	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.980
LOC101173720	trrap	ENSORLP00000035209	ENSORLP00000042766	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.997
LOC101173720	usp3	ENSORLP00000035209	ENSORLP00000009217	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	Ubiquitin carboxyl-terminal hydrolase.	0.781
rps27a	LOC101159038	ENSORLP00000038189	ENSORLP00000016388	Ribosomal protein S27a.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.592
rps27a	tada2b	ENSORLP00000038189	ENSORLP00000044705	Ribosomal protein S27a.	Transcriptional adapter.	0.574