Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC101167870CDC42 effector protein (Rho GTPase binding) 4a. (345 aa)    
Predicted Functional Partners:
LOC101158211
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.757
LOC101155717
Septin 7b; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.757
LOC105358736
Septin 15; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 0.757
septin10
Septin 10; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
 
 0.730
LOC101169609
BAI1-associated protein 2a.
   
 
 0.727
baiap2l1
BAI1-associated protein 2-like 1a.
   
 
 0.669
LOC101163820
BAI1-associated protein 2-like 1b.
   
 
 0.669
LOC101168786
SET domain containing 1A, histone lysine methyltransferase.
      
 0.656
LOC101159069
AT rich interactive domain 1Ab (SWI-like).
      
 0.656
rab13
Uncharacterized protein.
     
 0.654
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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