Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mlf1Myeloid leukemia factor 1. (232 aa)    
Predicted Functional Partners:
Knl1
Uncharacterized protein.
    
   0.904
LOC101159673
DSN1 component of MIS12 kinetochore complex.
    
 
 0.765
LOC101165659
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
 
 0.718
LOC101175099
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
   
 
 0.718
gfm1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Does not mediate the disassembly of ribosomes from messenger RNA at the termination of mito [...]
      
 0.713
LOC101174218
J domain-containing protein.
   
 
 0.704
dnajb6
DnaJ heat shock protein family (Hsp40) member B6b.
   
 
 0.704
adam23
ADAM metallopeptidase domain 23.
      
 0.704
spc24
SPC24 component of NDC80 kinetochore complex.
    
   0.697
dnajb2
DnaJ heat shock protein family (Hsp40) member B2.
   
 
 0.683
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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