STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
colqCollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. (454 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.562
ENSORLP00000036829
Uncharacterized protein.
  
     0.485
hacl1
2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family.
 
 
    0.472
ENSORLP00000027031
Uncharacterized protein.
  
     0.464
Tep1
Uncharacterized protein.
    
 0.412
hspg2
Heparan sulfate proteoglycan 2.
   
 
 0.411
ENSORLP00000040907
TROVE domain-containing protein.
    
 0.410
ENSORLP00000041818
Uncharacterized protein.
    
 0.405
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.400
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
    
 
 0.400
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.