Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
colqCollagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase. (454 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
    
 0.679
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.609
LOC101166241
Cholinergic receptor, nicotinic, epsilon.
    
 
 0.604
ache
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.557
bche
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.556
LOC101169010
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.556
DOK7
Docking protein 7.
      
 0.535
LOC101155825
Docking protein 7.
      
 0.535
agrn
Agrin.
    
 0.524
LOC101170101
Glutamine--fructose-6-phosphate transaminase 1.
   
  
 0.519
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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