Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r2Protein phosphatase 1, regulatory (inhibitor) subunit 2. (206 aa)    
Predicted Functional Partners:
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
   
 
 0.946
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
    
 
 0.905
LOC101158483
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.763
LOC101155811
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.763
ppp1r8
Protein phosphatase 1, regulatory subunit 8b.
    
 
 0.748
LOC101169945
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.728
LOC101171445
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.728
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.728
LOC101169215
Phostensin domain-containing protein.
    
 
 0.682
LOC101168720
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 
 0.640
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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