Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
dapk2Death-associated protein kinase 2b; Belongs to the protein kinase superfamily. (363 aa)    
Predicted Functional Partners:
becn1
Beclin 1.
   
 0.931
ENSORLP00000031355
Uncharacterized protein.
 
  
   0.903
ENSORLP00000030974
Uncharacterized protein.
 
  
   0.875
ENSORLP00000033786
Uncharacterized protein.
 
  
   0.863
H2L7M1_ORYLA
DH domain-containing protein.
 
  
  0.828
ENSORLP00000028632
Uncharacterized protein.
 
  
   0.812
ENSORLP00000027319
Uncharacterized protein.
 
  
   0.804
ENSORLP00000034808
Uncharacterized protein.
 
  
  0.797
ENSORLP00000042107
Uncharacterized protein.
 
  
   0.677
ENSORLP00000041646
Uncharacterized protein.
 
  
   0.666
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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