STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapk2Death-associated protein kinase 2b; Belongs to the protein kinase superfamily. (363 aa)    
Predicted Functional Partners:
becn1
Beclin 1.
   
 0.919
ENSORLP00000031355
Uncharacterized protein.
 
  
   0.900
ENSORLP00000030974
Uncharacterized protein.
 
  
   0.870
ENSORLP00000033786
Uncharacterized protein.
 
  
   0.858
H2L7M1_ORYLA
DH domain-containing protein.
 
  
   0.819
ENSORLP00000028632
Uncharacterized protein.
 
  
   0.806
ENSORLP00000027319
Uncharacterized protein.
 
  
   0.797
ENSORLP00000034808
Uncharacterized protein.
 
  
   0.786
ENSORLP00000042107
Uncharacterized protein.
 
  
   0.666
ENSORLP00000041646
Uncharacterized protein.
 
  
   0.654
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.