Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem204Transmembrane protein 204. (226 aa)    
Predicted Functional Partners:
kbtbd12
Kelch repeat and BTB (POZ) domain containing 12.
   
  
 0.603
atr
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
      
 0.566
rrp36
Ribosomal RNA processing 36.
      
 0.564
trappc6b
Trafficking protein particle complex 6b.
      
 0.564
xpc
Xeroderma pigmentosum, complementation group C.
      
 0.562
LOC101171520
TPR_REGION domain-containing protein.
      
 0.535
cfap161
Cilia and flagella associated protein 161.
      
 0.523
H2LM76_ORYLA
Fin bud initiation factor a.
  
   
 0.503
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.498
LOC101167596
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (12%) [HD]