Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155291Signal-induced proliferation-associated 1. (1034 aa)    
Predicted Functional Partners:
LOC101175047
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.820
H2LE95_ORYLA
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
   
  
 0.786
RAP2B
RAP2B, member of RAS oncogene family.
    
 0.597
RAP2A
Uncharacterized protein.
    
 0.597
LOC101156270
Uncharacterized protein.
     
 0.587
LOC101162607
Leucine zipper, putative tumor suppressor family member 3b.
    
 0.565
LOC101167529
RAP1A, member of RAS oncogene family b.
    
 0.548
LOC101172864
Uncharacterized protein.
    
 0.548
LOC101171247
RAP1A, member of RAS oncogene family a.
    
 0.548
LOC101174851
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.541
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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