Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chn2Chimerin 2. (465 aa)    
Predicted Functional Partners:
nck1
Cytoplasmic protein.
    
 0.567
nck2
Cytoplasmic protein.
    
 0.567
LOC101175240
Homeobox B13a.
      
 0.556
LOC101169540
Homeobox B8a.
      
 0.514
hemk1
HemK methyltransferase family member 1.
    
   0.508
LOC105354522
Rac family small GTPase 3b.
    
 0.504
LOC101159016
Uncharacterized protein.
    
 0.504
LOC101175028
Uncharacterized protein.
    
 0.504
LOC101163549
Uncharacterized protein.
    
 0.504
CDC42
Cell division cycle 42.
    
 0.490
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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