STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan10Tetraspanin. (325 aa)    
Predicted Functional Partners:
kirrel2
Kirre like nephrin family adhesion molecule 3, like.
    
 0.636
slc24a5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.597
ca10
Carbonic anhydrase Xa; Belongs to the alpha-carbonic anhydrase family.
      
 0.589
slc2a11b
Solute carrier family 2 member 11b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.559
LOC101174770
Tetraspanin.
      
0.558
LOC101155954
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.537
pmel
Premelanosome protein a.
   
  
 0.532
dct
Dopachrome tautomerase.
   
 
 0.522
slc45a2
Uncharacterized protein.
   
  
 0.505
tyrp1
Tyrosinase related protein 1.
   
 
 0.480
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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