STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101156026Ornithine decarboxylase antizyme 1b. (205 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.957
azin1
Antizyme inhibitor 1a; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.896
LOC101162142
Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.896
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.592
psma8
Proteasome subunit alpha type.
   
 
  0.585
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.572
psmb2
Proteasome subunit beta.
   
 
 0.565
rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
  
 0.560
psma5
Proteasome subunit alpha type.
   
 
  0.554
psmc3
Proteasome 26S subunit ATPase 3; Belongs to the AAA ATPase family.
   
 
 0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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