STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (473 aa)    
Predicted Functional Partners:
htr2a
5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a.
  
 
0.970
LOC101165845
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
    
0.965
LOC101168718
Uncharacterized protein.
    
 0.955
LOC101161353
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.955
LOC101167719
Uncharacterized protein.
    
  0.915
LOC101168962
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.842
LOC101157684
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.812
LOC101156825
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.721
slc6a4
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.709
LOC101158934
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.569
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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