close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166958Kruppel-like factor 13. (242 aa)    
Predicted Functional Partners:
LOC105353580
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
     
 0.568
LOC101171593
MYC binding protein.
    
 
 0.560
hsd11b1l
Hydroxysteroid (11-beta) dehydrogenase 1-like a.
    
 
 0.538
birc6
Baculoviral IAP repeat containing 6.
    
 0.514
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.514
spen
Si:ch1073-335m2.2.
   
 
 0.513
LOC101159000
Spen family transcriptional repressor.
   
 
 0.513
Mycbp2
RING-type domain-containing protein.
    
 
 0.507
STEAP3
STEAP family member 3, metalloreductase.
      
 0.501
hsd11b1l-2
11-beta-hydroxysteroid dehydrogenase type 3.
    
 
 0.492
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.