STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166261Solute carrier family 51 alpha subunit. (324 aa)    
Predicted Functional Partners:
LOC101159601
Ras homolog family member Ub.
      
 0.607
LOC101170629
Nucleic acid binding protein 1a.
      
 0.598
spata22
Spermatogenesis associated 22.
      
 0.534
LOC101156981
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.489
arl4c
ADP-ribosylation factor-like 4Cb; Belongs to the small GTPase superfamily. Arf family.
      
 0.433
ENSORLP00000043942
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
      
 0.433
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.