STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACVR1BReceptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (456 aa)    
Predicted Functional Partners:
INHBB
Inhibin subunit beta B.
   
 0.983
bambi
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
    
 0.972
LOC100144359
TGF_BETA_2 domain-containing protein.
   
 0.964
LOC101170230
Inhibin subunit beta Aa.
   
 0.964
mstn
TGF_BETA_2 domain-containing protein.
    
 0.960
LOC101169523
Mothers against decapentaplegic homolog.
   
 0.958
LOC101159109
Mothers against decapentaplegic homolog.
   
 0.958
LOC101166143
Growth differentiation factor 9.
    
 0.957
gdf11
Growth differentiation factor 11.
    
 0.956
LOC101162532
Southpaw.
    
 0.954
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.