pkd1l2 protein (Oryzias latipes) - STRING interaction network

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Score

pkd1l2

Polycystic kidney disease 1 like 2a. (1638 aa)

Predicted Functional Partners:

pkd2l1

0.802

pkd2

0.755

trpm2

0.690

myot

0.668

LOC100125495

0.658

slc9a3r2

0.632

nthl1

0.626

dhodh

0.616

TSC2

0.558

Tsc2

0.532

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100125495	TSC2	ENSORLP00000008514	ENSORLP00000014632	Beta-carotene oxygenase 1.	TSC complex subunit 2.	0.538
LOC100125495	Tsc2	ENSORLP00000008514	ENSORLP00000032706	Beta-carotene oxygenase 1.	DUF3384 domain-containing protein.	0.480
LOC100125495	nthl1	ENSORLP00000008514	ENSORLP00000014640	Beta-carotene oxygenase 1.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.617
LOC100125495	pkd1l2	ENSORLP00000008514	ENSORLP00000009492	Beta-carotene oxygenase 1.	Polycystic kidney disease 1 like 2a.	0.658
LOC100125495	slc9a3r2	ENSORLP00000008514	ENSORLP00000014675	Beta-carotene oxygenase 1.	Uncharacterized protein.	0.460
TSC2	LOC100125495	ENSORLP00000014632	ENSORLP00000008514	TSC complex subunit 2.	Beta-carotene oxygenase 1.	0.538
TSC2	Tsc2	ENSORLP00000014632	ENSORLP00000032706	TSC complex subunit 2.	DUF3384 domain-containing protein.	0.922
TSC2	nthl1	ENSORLP00000014632	ENSORLP00000014640	TSC complex subunit 2.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.532
TSC2	pkd1l2	ENSORLP00000014632	ENSORLP00000009492	TSC complex subunit 2.	Polycystic kidney disease 1 like 2a.	0.558
Tsc2	LOC100125495	ENSORLP00000032706	ENSORLP00000008514	DUF3384 domain-containing protein.	Beta-carotene oxygenase 1.	0.480
Tsc2	TSC2	ENSORLP00000032706	ENSORLP00000014632	DUF3384 domain-containing protein.	TSC complex subunit 2.	0.922
Tsc2	nthl1	ENSORLP00000032706	ENSORLP00000014640	DUF3384 domain-containing protein.	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	0.508
Tsc2	pkd1l2	ENSORLP00000032706	ENSORLP00000009492	DUF3384 domain-containing protein.	Polycystic kidney disease 1 like 2a.	0.532
dhodh	pkd1l2	ENSORLP00000007295	ENSORLP00000009492	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Polycystic kidney disease 1 like 2a.	0.616
dhodh	pkd2l1	ENSORLP00000007295	ENSORLP00000017222	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	EF-hand domain-containing protein.	0.535
dhodh	slc9a3r2	ENSORLP00000007295	ENSORLP00000014675	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	Uncharacterized protein.	0.591
myot	pkd1l2	ENSORLP00000011255	ENSORLP00000009492	Uncharacterized protein.	Polycystic kidney disease 1 like 2a.	0.668
nthl1	LOC100125495	ENSORLP00000014640	ENSORLP00000008514	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	Beta-carotene oxygenase 1.	0.617
nthl1	TSC2	ENSORLP00000014640	ENSORLP00000014632	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	TSC complex subunit 2.	0.532
nthl1	Tsc2	ENSORLP00000014640	ENSORLP00000032706	Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family.	DUF3384 domain-containing protein.	0.508