STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LTT3_ORYLAMyosin IHa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (586 aa)    
Predicted Functional Partners:
Myo1h
Myosin IHa.
 
      0.853
H2M010_ORYLA
Uncharacterized protein.
 
      0.832
ENSORLP00000031955
Uncharacterized protein.
 
 
    0.733
MYH6
Myosin_tail_1 domain-containing protein.
 
  
  0.640
LOC101159762
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.531
ENSORLP00000039417
MyTH4 domain-containing protein.
 
 
    0.524
LOC101167616
Usher syndrome 1C.
   
 0.477
LOC101156094
Whirlin b.
    
 0.435
whrn
Whirlin a.
    
 0.435
LOC111948431
TH1 domain-containing protein.
 
  
  0.414
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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