STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2LTT3_ORYLAMyosin IHa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (586 aa)    
Predicted Functional Partners:
Myo1h
Myosin IHa.
 
      0.853
H2M010_ORYLA
Uncharacterized protein.
 
      0.832
ENSORLP00000031955
Uncharacterized protein.
 
      0.732
MYH6
Myosin_tail_1 domain-containing protein.
 
  
  0.628
LOC101167616
Usher syndrome 1C.
   
 0.532
ENSORLP00000039417
MyTH4 domain-containing protein.
 
      0.523
LOC101156094
Whirlin b.
    
 0.489
whrn
Whirlin a.
    
 0.489
LOC101169538
Usher syndrome 1Ga (autosomal recessive).
   
 0.477
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.477
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.