STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grik4Glutamate receptor, ionotropic, kainate 4. (968 aa)    
Predicted Functional Partners:
grik1
Glutamate receptor, ionotropic, kainate 1b.
  
0.956
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
  
0.956
LOC101173326
Glutamate receptor, ionotropic, kainate 1a.
  
0.956
GRIK2-2
Glutamate ionotropic receptor kainate type subunit 2.
  
0.956
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
0.956
LOC101155942
Uncharacterized protein.
  
  
 
0.900
grik5
Glutamate receptor, ionotropic, kainate 5.
  
  
 
0.900
H2MFT6_ORYLA
Uncharacterized protein.
    
   0.737
LOC101159506
Calcium channel, voltage-dependent, gamma subunit 5b.
   
 0.657
LOC101163260
Calcium channel, voltage-dependent, gamma subunit 8a.
    
 0.651
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.