STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM1Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (254 aa)    
Predicted Functional Partners:
pgk1
Phosphoglycerate kinase.
   
 0.996
LOC101159663
Enolase 1b, (alpha).
  
 0.982
eno1
Enolase 1a, (alpha).
  
 0.982
ENO2
Enolase 2.
  
 0.982
LOC101165077
Enolase 2.
  
 0.982
eno4
Enolase 4.
  
 0.969
LOC101173933
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.949
gpi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.949
LOC101164987
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
  
0.941
tpi1
Triosephosphate isomerase.
  
 0.937
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.