Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC101160155Membrane associated guanylate kinase, WW and PDZ domain containing 3b. (1467 aa)    
Predicted Functional Partners:
rhbdl3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
  
 0.676
gmps
Guanine monophosphate synthase.
  
 
 0.672
brd9
Bromodomain containing 9.
      
 0.665
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.654
LOC101173369
Junction plakoglobin a.
   
 0.653
LOC101171502
Uncharacterized protein.
   
 0.651
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.650
LOC101167009
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.650
LOC101155299
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.650
LOC101173865
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
 0.650
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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