STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160155Membrane associated guanylate kinase, WW and PDZ domain containing 3b. (1467 aa)    
Predicted Functional Partners:
rhbdl3
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
  
 0.615
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.570
H2M6E4_ORYLA
Uncharacterized protein.
    
 0.557
LOC101165932
Intersectin 2a.
    
 0.557
ENSORLP00000034742
Uncharacterized protein.
    
 0.557
ENSORLP00000036645
EH domain-containing protein.
    
 0.557
ENSORLP00000041578
SH3 domain-containing protein.
    
 0.557
gmps
Guanine monophosphate synthase.
  
 
 0.546
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
  
 0.544
LOC101169874
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.533
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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