STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cblCbl proto-oncogene, E3 ubiquitin protein ligase. (946 aa)    
Predicted Functional Partners:
LOC101169984
Receptor protein-tyrosine kinase.
    
 0.977
egfr
Receptor protein-tyrosine kinase.
    
 0.974
rapgef1
Uncharacterized protein.
    
 0.961
SH2B2
SH2B adaptor protein 2.
    
 0.956
LOC101175393
Macrophage stimulating 1 receptor a.
   
 0.944
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.944
mst1r
Macrophage stimulating 1 receptor b.
   
 0.944
LOC101166254
Tyrosine-protein kinase receptor.
    
 0.931
grb2
Growth factor receptor-bound protein 2b.
    
 0.922
LOC101171145
Sprouty RTK signaling antagonist 2.
    
 0.917
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.