STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eef1aElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily. (461 aa)    
Predicted Functional Partners:
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 0.980
eef1b2
Eukaryotic translation elongation factor 1 beta 2; Belongs to the EF-1-beta/EF-1-delta family.
  
 0.966
rps3a
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.931
rpl8
60S ribosomal protein L8.
   
 0.928
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.924
rps19
Ribosomal protein S19.
   
 0.922
rpl12
Ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 0.920
rpl32
Ribosomal protein L32.
   
 0.920
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.919
rps11
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 0.915
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.