STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd34Uncharacterized protein. (328 aa)    
Predicted Functional Partners:
Sell
C-type lectin domain-containing protein.
   
 
 0.956
LOC101157618
Uncharacterized protein.
     
 
0.900
crkl
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 
 0.702
ccnk
Cyclin K; Belongs to the cyclin family.
   
  
 0.694
LOC110016899
Thrombopoietin.
      
 0.686
LOC100125525
Uncharacterized protein.
      
 0.674
LOC101168676
CD38 molecule.
      
 0.663
LOC101159348
Link domain-containing protein.
      
 0.646
LOC101174288
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.603
flt3
Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
  
 0.587
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.