STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc22DnaJ (Hsp40) homolog, subfamily C, member 22. (339 aa)    
Predicted Functional Partners:
pithd1
PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.
      
 0.704
zc3h15
Zinc finger CCCH-type containing 15.
   
 
 0.700
dusp28
Dual specificity phosphatase 28.
   
 
 0.697
WDR33
WD repeat domain 33.
   
 
 0.696
LOC101163615
FRA10A associated CGG repeat 1.
      
 0.694
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.688
lmbrd2
LMBR1 domain containing 2b.
      
 0.688
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.687
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
      
 0.675
DNAJA4
Uncharacterized protein.
   
 0.673
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.