STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ice2Interactor of little elongator complex ELL subunit 2. (932 aa)    
Predicted Functional Partners:
ell
Elongation factor RNA polymerase II.
    
 0.926
LOC101159914
Si:ch211-13k12.2.
    
 0.885
ell2
Elongation factor, RNA polymerase II, 2.
    
 0.885
LOC101155504
Uncharacterized protein.
    
 0.885
LOC101166672
Uncharacterized protein.
    
 0.868
rpap2
RNA polymerase II associated protein 2.
   
 
 0.835
eaf1
ELL associated factor 1.
    
 
 0.808
zc3h4
Zinc finger CCCH-type containing 4.
     
 0.790
uspl1
Ubiquitin specific peptidase like 1.
   
 
 0.744
pibf1
Progesterone immunomodulatory binding factor 1.
   
  
 0.712
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.