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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ice2Interactor of little elongator complex ELL subunit 2. (932 aa)    
Predicted Functional Partners:
ell
Elongation factor RNA polymerase II.
    
 0.827
LOC101159914
Si:ch211-13k12.2.
    
 0.788
ell2
Elongation factor, RNA polymerase II, 2.
    
 0.788
LOC101155504
Uncharacterized protein.
    
 0.788
LOC101166672
Uncharacterized protein.
    
 0.763
zc3h4
Zinc finger CCCH-type containing 4.
     
 0.731
rpap2
RNA polymerase II associated protein 2.
   
 
 0.730
eaf1
ELL associated factor 1.
    
 0.730
LOC101154988
ELL associated factor 2.
    
 0.721
zc3h6
Zinc finger CCCH-type containing 6.
     
 0.676
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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