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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mab21l2Mab-21-like 2. (359 aa)    
Predicted Functional Partners:
pax6
Paired box protein Pax-6; May be a transcription factor with important functions in eye and nasal development; Belongs to the paired homeobox family.
   
  
 0.568
LOC101169335
Unc4.1 homeobox (C. elegans).
   
 
 0.562
pdyn
Prodynorphin.
      
 0.558
dmbx1
Uncharacterized protein.
    
 
 0.552
LOC101169307
Angiomotin.
      
 0.549
thrsp
Thyroid hormone responsive.
    
  0.534
LOC101157758
Acyl-CoA synthetase short chain family member 2.
      
 0.520
aadat
Aminoadipate aminotransferase.
      
 0.520
exoc6
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.497
maml2
MamL-1 domain-containing protein.
      
 0.483
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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