Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mab21l2Mab-21-like 2. (359 aa)    
Predicted Functional Partners:
fam222a
Family with sequence similarity 222 member A.
    
   0.735
pdyn
Prodynorphin.
      
 0.715
LOC101169307
Angiomotin.
      
 0.710
maml2
MamL-1 domain-containing protein.
      
 0.668
Maml3
Uncharacterized protein.
      
 0.608
pax6
Paired box protein Pax-6; May be a transcription factor with important functions in eye and nasal development; Belongs to the paired homeobox family.
    
 
 0.593
lhx2
LIM homeobox 2b.
   
 
 0.591
thrsp
Thyroid hormone responsive.
    
  0.561
LOC101155103
Uncharacterized protein.
      
 0.540
LOC101167788
RNA binding motif protein 39b.
      
 0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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