Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2LU26_ORYLALysyl oxidase-like 4. (342 aa)    
Predicted Functional Partners:
ENSORLP00000027381
Lysyl oxidase-like 4.
 
      0.893
LOC101171929
Lysyl oxidase a.
 
   
  0.704
LOC101166747
Lysyl oxidase-like 5b.
 
 
  0.630
LOX
Lysyl oxidase.
 
   
  0.570
DHX15
Uncharacterized protein.
    
  0.528
LOC101166992
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
  0.528
LOC101171509
Uncharacterized protein.
    
 0.501
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.