Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
wdr24WD repeat domain 24. (788 aa)    
Predicted Functional Partners:
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
    
 0.999
mios
Missing oocyte, meiosis regulator, homolog (Drosophila).
    
 0.999
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 0.999
Depdc5
Uncharacterized protein.
   
 0.999
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.999
wdr59
WD repeat domain 59.
   
0.999
nprl3
NPR3-like, GATOR1 complex subunit.
    
 0.997
c23h12orf66
Si:ch211-125a15.1.
    
 0.997
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.995
kptn
Kaptin (actin binding protein).
   
 0.994
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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