STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161142Vomeronasal type-1 receptor. (313 aa)    
Predicted Functional Partners:
LOC101158998
Olfactory receptor class A related 3; Belongs to the G-protein coupled receptor T2R family.
      
 0.882
ENSORLP00000025924
Olfactory receptor class A related 5.
      
 0.833
LOC101159490
Olfactory receptor class A related 4.
      
0.661
sult6b1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.595
LOC101154790
Angiopoietin 2b.
      
 0.524
avpr2
Vasotocin type 2 receptor.
      
 0.506
H2MJD0_ORYLA
Olfactory marker protein b.
      
 0.502
LOC101166404
Olfactory marker protein a.
      
 0.499
gpr1
G protein-coupled receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.495
gpatch3
G patch domain containing 3.
      
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.