Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gnptgN-acetylglucosamine-1-phosphate transferase subunit gamma. (301 aa)    
Predicted Functional Partners:
gnptab
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
    
 0.996
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
   
 0.940
nagpa
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
 0.898
LOC101159642
Calmegin.
   
 0.704
canx
Calnexin.
   
 0.704
sec63
SEC63 homolog, protein translocation regulator.
   
  
 0.698
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
  0.609
p4hb
Protein disulfide-isomerase.
   
 0.534
LOC101164281
Protein disulfide-isomerase.
   
 0.534
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.521
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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