Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xxylt1Xyloside xylosyltransferase 1. (402 aa)    
Predicted Functional Partners:
poglut1
Protein O-glucosyltransferase 1.
      
 0.714
LOC101157167
Receptor expression-enhancing protein.
      
 0.630
LOC101160408
Family with sequence similarity 174 member B.
      
 0.574
st6galnac3
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.573
st6galnac4
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.573
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.570
pofut1
Uncharacterized protein.
      
 0.541
gxylt2
Glucoside xylosyltransferase 2.
      
 0.498
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
      
 0.465
svbp
Small vasohibin binding protein.
    
 0.447
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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