Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tsr3Probable ribosome biogenesis protein tsr3; Probable pre-rRNA processing protein involved in ribosome biogenesis. (287 aa)    
Predicted Functional Partners:
tsr2
TSR2 ribosome maturation factor.
   
  
 0.953
tsr1
TSR1 ribosome maturation factor.
   
  
 0.892
dtwd1
DTW domain containing 1.
      
 0.856
dtwd2
DTW domain containing 2.
      
 0.856
dpy19l3
Dpy-19 like C-mannosyltransferase 3.
      
 0.827
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
 
 
  
 0.816
dpy19l1
Dpy-19-like 1, like (H. sapiens).
      
 0.781
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
  
 0.780
antkmt
Family with sequence similarity 173 member A.
   
  
 0.721
ebpl
EBP like.
      
 0.717
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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