Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101158233DUF667 domain-containing protein. (192 aa)    
Predicted Functional Partners:
tbc1d32
TBC1 domain family, member 32.
    
 
 0.793
cfap52
Cilia and flagella associated protein 52.
    
 
 0.760
cfap161
Cilia and flagella associated protein 161.
    
 
 0.757
clasrp
CLK4-associating serine/arginine rich protein.
   
 
 0.756
pacrg
PARK2 co-regulated.
    
 
 0.748
arl2bp
ADP-ribosylation factor-like 2 binding protein.
    
 
 0.742
efhc1
EF-hand domain (C-terminal) containing 1.
    
 
 0.738
spag8
Sperm associated antigen 8.
    
 
 0.734
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
   
 
 0.730
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.729
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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