Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
atg10ATG10 autophagy related 10 homolog (S. cerevisiae). (256 aa)    
Predicted Functional Partners:
atg12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.999
atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.997
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 0.996
atg3
Autophagy-related protein 3.
    
 
 0.959
atg16l2
WD_REPEATS_REGION domain-containing protein.
    
 0.950
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
      
 0.844
becn1
Beclin 1.
      
 0.832
atg101
Autophagy related 101.
      
 0.829
atg14
Autophagy related 14.
      
 0.777
uvrag
UV radiation resistance associated gene.
      
 0.762
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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