STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem154Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
prr16
Proline rich 16.
      
 0.703
Tmem223
Transmembrane protein 223.
      
 0.676
tmem38a
Transmembrane protein 38A.
      
 0.647
arfip1
ADP-ribosylation factor interacting protein 1 (arfaptin 1).
      
 0.508
mov10l1
Uncharacterized protein.
      
 0.503
MOV10
Uncharacterized protein.
      
 0.503
LOC101175667
Helicase ATP-binding domain-containing protein.
      
 0.503
H2LKL8_ORYLA
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.498
tmem53
Transmembrane protein 53.
      
 0.498
ltn1
RING-type domain-containing protein.
      
 0.491
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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