STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neto1Neuropilin (NRP) and tolloid (TLL)-like 1, like. (565 aa)    
Predicted Functional Partners:
zfhx4
Zinc finger homeobox 4.
      
 0.521
rgs11
Regulator of G protein signaling 11.
   
  
 0.513
cabp5
Calcium binding protein 5a.
   
  
 0.509
gnao1
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
   
  
 0.440
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
      
 0.432
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.