STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
socs6Suppressor of cytokine signaling 6. (536 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.961
ELOB
Ubiquitin-like domain-containing protein.
    
 0.955
CUL5
Cullin 5; Belongs to the cullin family.
   
 0.898
LOC101154889
Cullin 5; Belongs to the cullin family.
   
 0.898
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.720
arih2
RBR-type E3 ubiquitin transferase.
    
   0.678
rnf7
Ring finger protein 7.
   
 0.673
LOC101164124
Suppressor of cytokine signaling 2.
     
 0.667
LOC101164953
Mast/stem cell growth factor receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.663
LOC111948643
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.663
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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