STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a35Solute carrier family 25 member 35; Belongs to the mitochondrial carrier (TC 2.A.29) family. (316 aa)    
Predicted Functional Partners:
LOC101163345
MFS domain-containing protein.
      
 0.690
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.629
palb2
PALB2_WD40 domain-containing protein.
    
   0.629
TMEM82
Transmembrane protein 82.
 
    
 0.623
slc30a3
Solute carrier family 30 member 2.
      
 0.612
svopl
SVOP-like.
      
 0.603
Mdh2
Malate dehydrogenase.
    
   0.597
slc22a15
Solute carrier family 22 member 15.
   
  
 0.586
LOC101167354
Solute carrier family 38 member 8b.
   
  
 0.508
slc38a8
Solute carrier family 38 member 8a.
      
 0.498
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.