STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101173307Transmembrane channel-like protein. (775 aa)    
Predicted Functional Partners:
LOC101162873
Leucine rich repeat containing 18b.
    
 0.618
rasd1
Uncharacterized protein.
    
 0.611
ADAP1
ArfGAP with dual PH domains 1.
    
 
 0.590
LOC101158978
Mitogen-activated protein kinase.
    
 
 0.589
myadml2
Myeloid-associated differentiation marker-like 2.
      
 0.586
MYADML2
Myeloid associated differentiation marker like 2.
      
 0.586
notum
Notum, palmitoleoyl-protein carboxylesterase a.
      
 0.585
vstm4
V-set and transmembrane domain containing 4b.
      
 0.582
abca3
ATP-binding cassette, sub-family A (ABC1), member 3b.
    
 
 0.531
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
    
 
 0.526
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.