Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101161474Zgc:162592; Belongs to the G-protein coupled receptor 1 family. (365 aa)    
Predicted Functional Partners:
LOC101175549
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.683
htr1f
5-hydroxytryptamine (serotonin) receptor 1Fb.
     
 0.550
HTR1B
5-hydroxytryptamine receptor 1B.
     
 0.509
HTR1B-2
5-hydroxytryptamine receptor 1B.
     
 0.509
LOC101166797
Parvalbumin 8; Belongs to the parvalbumin family.
     
 0.490
H2M6Y0_ORYLA
Adrenoceptor beta 3a; Belongs to the G-protein coupled receptor 1 family.
     
0.455
LOC101161365
Protocadherin 2 alpha b 9.
      
 0.427
PCDHAC2
Protocadherin alpha subfamily C, 2.
      
 0.426
gng2
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.424
LOC101169460
Cytoskeleton associated protein 2-like.
  
     0.424
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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