STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101155998Cytochrome b5 type B; Belongs to the cytochrome b5 family. (151 aa)    
Predicted Functional Partners:
LOC101158817
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.887
LOC101175543
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 0.887
LOC101173088
Cytochrome b5 reductase 4.
   
0.837
nenf
Neudesin neurotrophic factor; Belongs to the cytochrome b5 family.
   
  
 0.743
suox
Sulfite oxidase.
   
  
0.707
pgrmc1
Progestin receptor membrane component 1; Belongs to the cytochrome b5 family.
   
  
 0.696
H2N0C8_ORYLA
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.682
MARC2
Mitochondrial amidoxime reducing component 2.
   
 
 0.671
pgrmc2
Progestin receptor membrane component 2; Belongs to the cytochrome b5 family.
   
  
 0.658
LOC101173617
Malate synthase-like.
  
 
 0.638
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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