Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
myadml2Myeloid-associated differentiation marker-like 2. (303 aa)    
Predicted Functional Partners:
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
      
 0.776
pcyt2
Phosphate cytidylyltransferase 2, ethanolamine.
      
 0.776
rasd1
Uncharacterized protein.
      
 0.727
ADAP1
ArfGAP with dual PH domains 1.
      
 0.678
abca3
ATP-binding cassette, sub-family A (ABC1), member 3b.
   
  
 0.655
LOC101173307
Transmembrane channel-like protein.
      
 0.653
LOC101162873
Leucine rich repeat containing 18b.
      
 0.652
vstm4
V-set and transmembrane domain containing 4b.
      
 0.652
uroc1
Urocanate hydratase 1.
      
 0.639
cant1
Calcium activated nucleotidase 1a.
      
 0.616
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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